Package: Rsassy
Title: 'R' Bindings to the 'sassy' Approximate String Matcher
Version: 0.2.1-0.1.0.9000
Authors@R: c(
    person(given = "Sounkou Mahamane", family = "Toure",
      email = "sounkoutoure@gmail.com", role = c("aut", "cre")),
    person("Ragnar", "Groot Koerkamp", role = "cph"),
    person("Rick", "Beeloo", role = "cph")
  )
Description: Fast approximate string matching for short patterns in
        longer texts using the 'sassy' Rust crate. 'sassy' implements
        SIMD-accelerated fuzzy search over ASCII, DNA, and IUPAC
        alphabets, with support for reverse-complement search, overhang
        alignments, CIGAR strings, and batched searches. See Beeloo and
        Groot Koerkamp (2025) <doi:10.1101/2025.07.22.666207> and
        Beeloo and Groot Koerkamp (2026)
        <doi:10.64898/2026.03.10.710811>.
License: GPL (>= 2)
Copyright: See inst/AUTHORS and inst/LICENCE.note for bundled Rust
        crate authorship and licensing details.
Encoding: UTF-8
SystemRequirements: Cargo (Rust's package manager), rustc >= 1.91.0, xz
Suggests: knitr, rmarkdown, tinytest
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
URL: https://github.com/sounkou-bioinfo/Rsassy,
        https://sounkou-bioinfo.github.io/Rsassy/
BugReports: https://github.com/sounkou-bioinfo/Rsassy/issues
Config/Needs/website: pkgdown
Config/pak/sysreqs: xz-utils libclang-dev
Repository: https://sounkou-bioinfo.r-universe.dev
Date/Publication: 2026-05-31 04:20:03 UTC
RemoteUrl: https://github.com/sounkou-bioinfo/Rsassy
RemoteRef: HEAD
RemoteSha: 01a9181095ba98d9dc9824c18f477a58d7ea3817
NeedsCompilation: yes
Packaged: 2026-07-04 08:36:30 UTC; root
Author: Sounkou Mahamane Toure [aut, cre],
  Ragnar Groot Koerkamp [cph],
  Rick Beeloo [cph]
Maintainer: Sounkou Mahamane Toure <sounkoutoure@gmail.com>